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Domestic Scheduled Flights
| Origin | Destination | Carier |
| MHT | ABE Allentown, PA | Allegheny Airlines |
| MHT | ALB Albany, NY | Allegheny Airlines |
| MHT | BUF Buffalo, NY | Allegheny Airlines |
| MHT | BWI Baltimore, MD | Allegheny Airlines |
| MHT | ITH Ithaca, NY | Allegheny Airlines |
| MHT | LGA New York, NY | Allegheny Airlines |
| MHT | MDT Harrisburg, PA | Allegheny Airlines |
| MHT | ORF Norfolk, VA | Allegheny Airlines |
| MHT | PHL Philadelphia, PA | Allegheny Airlines |
| MHT | PVD Providence, RI | Allegheny Airlines |
| MHT | ROC Rochester, NY | Allegheny Airlines |
| MHT | SYR Syracuse, NY | Allegheny Airlines |
| MHT | ABE Allentown, PA | Atlantic Coast Airlines |
| MHT | BGM Binghamton, NY | Atlantic Coast Airlines |
| MHT | BHM Birmingham, AL | Atlantic Coast Airlines |
| MHT | BNA Nashville, TN | Atlantic Coast Airlines |
| MHT | BUF Buffalo, NY | Atlantic Coast Airlines |
| MHT | CAE Columbia, SC | Atlantic Coast Airlines |
| MHT | CHO Charlottesville, VA | Atlantic Coast Airlines |
| MHT | CHS Charleston, SC | Atlantic Coast Airlines |
| MHT | CLE Cleveland, OH | Atlantic Coast Airlines |
| MHT | CMH Columbus, OH | Atlantic Coast Airlines |
| MHT | CRW Charleston, WV | Atlantic Coast Airlines |
| MHT | DAY Dayton, OH | Atlantic Coast Airlines |
| MHT | DTW Detroit, MI | Atlantic Coast Airlines |
| MHT | EWR Newark, NJ | Atlantic Coast Airlines |
| MHT | GSO Greensboro/High Point, NC | Atlantic Coast Airlines |
| MHT | GSP Greer, SC | Atlantic Coast Airlines |
| MHT | HPN White Plains, NY | Atlantic Coast Airlines |
| MHT | IAD Washington, DC | Atlantic Coast Airlines |
| MHT | IND Indianapolis, IN | Atlantic Coast Airlines |
| MHT | JAX Jacksonville, FL | Atlantic Coast Airlines |
| MHT | JFK New York, NY | Atlantic Coast Airlines |
| MHT | LGA New York, NY | Atlantic Coast Airlines |
| MHT | MDT Harrisburg, PA | Atlantic Coast Airlines |
| MHT | ORD Chicago, IL | Atlantic Coast Airlines |
| MHT | ORF Norfolk, VA | Atlantic Coast Airlines |
| MHT | PHL Philadelphia, PA | Atlantic Coast Airlines |
| MHT | PIT Pittsburgh, PA | Atlantic Coast Airlines |
| MHT | RDU Raleigh/Durham, NC | Atlantic Coast Airlines |
| MHT | RIC Richmond, VA | Atlantic Coast Airlines |
| MHT | ROA Roanoke, VA | Atlantic Coast Airlines |
| MHT | ROC Rochester, NY | Atlantic Coast Airlines |
| MHT | SAV Savannah, GA | Atlantic Coast Airlines |
| MHT | SCE State College, PA | Atlantic Coast Airlines |
| MHT | SDF Louisville, KY | Atlantic Coast Airlines |
| MHT | SWF Newburgh, NY | Atlantic Coast Airlines |
| MHT | SYR Syracuse, NY | Atlantic Coast Airlines |
| MHT | TUL Tulsa, OK | Atlantic Coast Airlines |
| MHT | TYS Knoxville, TN | Atlantic Coast Airlines |
| MHT | ABE Allentown, PA | Commutair |
| MHT | ALB Albany, NY | Commutair |
| MHT | BDL Windsor Locks, CT | Commutair |
| MHT | BTV Burlington, VT | Commutair |
| MHT | BUF Buffalo, NY | Commutair |
| MHT | HPN White Plains, NY | Commutair |
| MHT | ISP Islip, NY | Commutair |
| MHT | LGA New York, NY | Commutair |
| MHT | MDT Harrisburg, PA | Commutair |
| MHT | PLB Plattsburgh, NY | Commutair |
| MHT | PVD Providence, RI | Commutair |
| MHT | PWM Portland, ME | Commutair |
| MHT | ROC Rochester, NY | Commutair |
| MHT | SLK Saranac Lake, NY | Commutair |
| MHT | SYR Syracuse, NY | Commutair |
| MHT | DCA Washington, DC, DC US | Continental Airlines |
| MHT | EWR Newark, NJ US | Continental Airlines |
| MHT | TPA Tampa, FL US | Continental Airlines |
| MHT | HOU Houston, TX US | Continental Airlines |
| MHT | IAH Houston, TX US | Continental Airlines |
| MHT | ORD Chicago, IL US | Continental Airlines |
| MHT | JFK New York City, NY US | Delta Air Lines |
| MHT | LGA New York City, NY US | Delta Air Lines |
| MHT | DFW Dallas / Ft Worth, TX US | Delta Air Lines |
| MHT | HOU Houston, TX US | Delta Air Lines |
| MHT | ORD Chicago, IL US | Delta Air Lines |
| MHT | IAD Washington, DC, DC US | Independence Air |
| MHT | MDW Chicago, IL US | Northwest Airlines |
| MHT | CAE Columbia, SC | Piedmont Airlines |
| MHT | CHS Charleston, SC | Piedmont Airlines |
| MHT | CRW Charleston, WV | Piedmont Airlines |
| MHT | DCA Washington, DC | Piedmont Airlines |
| MHT | GSO Greensboro/High Point, NC | Piedmont Airlines |
| MHT | GSP Greer, SC | Piedmont Airlines |
| MHT | ORF Norfolk, VA | Piedmont Airlines |
| MHT | RDU Raleigh/Durham, NC | Piedmont Airlines |
| MHT | TPA Tampa, FL US | Southwest Airlines |
| MHT | DAL Dallas, TX US | Southwest Airlines |
| MHT | HOU Houston, TX US | Southwest Airlines |
| MHT | MDW Chicago, IL US | Southwest Airlines |
| MHT | IAD Washington, DC, DC US | United Airlines |
| MHT | ORD Chicago, IL US | United Airlines |
| MHT | DCA Washington, DC, DC US | US Airways |
| MHT | LGA New York City, NY US | US Airways |
| MHT | TPA Tampa, FL US | US Airways |
| MHT | DFW Dallas / Ft Worth, TX US | US Airways |
| MHT | IAH Houston, TX US | US Airways |
There is over 97 domestic flights from MHT airport.
