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Domestic Scheduled Flights
| Origin | Destination | Carier |
| MTJ | DCA Washington, DC, DC US | American Airlines |
| MTJ | JFK New York City, NY US | American Airlines |
| MTJ | LGA New York City, NY US | American Airlines |
| MTJ | TPA Tampa, FL US | American Airlines |
| MTJ | DFW Dallas / Ft Worth, TX US | American Airlines |
| MTJ | HOU Houston, TX US | American Airlines |
| MTJ | IAH Houston, TX US | American Airlines |
| MTJ | MDW Chicago, IL US | American Airlines |
| MTJ | ORD Chicago, IL US | American Airlines |
| MTJ | DCA Washington, DC, DC US | Continental Airlines |
| MTJ | EWR Newark, NJ US | Continental Airlines |
| MTJ | IAD Washington, DC, DC US | Continental Airlines |
| MTJ | LGA New York City, NY US | Continental Airlines |
| MTJ | DAL Dallas, TX US | Continental Airlines |
| MTJ | IAH Houston, TX US | Continental Airlines |
| MTJ | IAD Washington, DC, DC US | Delta Air Lines |
| MTJ | JFK New York City, NY US | Delta Air Lines |
| MTJ | BFL Bakersfield, CA | Mesa Airlines, Inc. |
| MTJ | BOI Boise, ID | Mesa Airlines, Inc. |
| MTJ | CLD Carlsbad, CA | Mesa Airlines, Inc. |
| MTJ | DFW Dallas/Fort Worth, TX | Mesa Airlines, Inc. |
| MTJ | EUG Eugene, OR | Mesa Airlines, Inc. |
| MTJ | FAT Fresno, CA | Mesa Airlines, Inc. |
| MTJ | FLG Flagstaff, AZ | Mesa Airlines, Inc. |
| MTJ | LAX Los Angeles, CA | Mesa Airlines, Inc. |
| MTJ | LGB Long Beach, CA | Mesa Airlines, Inc. |
| MTJ | MRY Monterey, CA | Mesa Airlines, Inc. |
| MTJ | PHX Phoenix, AZ | Mesa Airlines, Inc. |
| MTJ | PSP Palm Springs, CA | Mesa Airlines, Inc. |
| MTJ | SBA Santa Barbara, CA | Mesa Airlines, Inc. |
| MTJ | SBP San Luis Obispo, CA | Mesa Airlines, Inc. |
| MTJ | SCK Stockton, CA | Mesa Airlines, Inc. |
| MTJ | YUM Yuma, AZ | Mesa Airlines, Inc. |
| MTJ | BIS Bismarck, ND | Sky West Airlines, Inc. |
| MTJ | DEN Denver, CO | Sky West Airlines, Inc. |
| MTJ | FAT Fresno, CA | Sky West Airlines, Inc. |
| MTJ | MEM Memphis, TN | Sky West Airlines, Inc. |
| MTJ | MSO Missoula, MT | Sky West Airlines, Inc. |
| MTJ | RAP Rapid City, SD | Sky West Airlines, Inc. |
| MTJ | SAN San Diego, CA | Sky West Airlines, Inc. |
| MTJ | SGU St. George, UT | Sky West Airlines, Inc. |
| MTJ | EWR Newark, NJ US | United Airlines |
| MTJ | IAD Washington, DC, DC US | United Airlines |
| MTJ | JFK New York City, NY US | United Airlines |
| MTJ | LGA New York City, NY US | United Airlines |
| MTJ | TPA Tampa, FL US | United Airlines |
| MTJ | DFW Dallas / Ft Worth, TX US | United Airlines |
| MTJ | ORD Chicago, IL US | United Airlines |
There is over 48 domestic flights from MTJ airport.
